Configure Image
 
image width:pixels
label area width:characters
text size:
Show light blue vertical guidelines, or light red vertical window separators in multi-region view
Display labels to the left of items in tracks
Display description above each track
Show track controls under main graphic
Next/previous item navigation
Next/previous exon navigation
Show exon numbers
Enable highlight with drag-and-select (if unchecked, drag-and-select always zooms to selection)

Configure Tracks on UCSC Genome Browser: Human Repeats Repeat Browser 2020 (hg38reps)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Short Match Perfect Matches to Short Sequence ()
-   Annotations of Repeat Consensuses    
Consensus Sequence Repeat Browser Consensus
Consensus Annotations Dfam/RepeatMasker Annotations
GENCODEv32 CDS GENCODEv32 CDS exons
GENCODEv32 ncRNA GENCODEv32 ncRNA exons
GENCODEv32 UTRs GENCODEv32 UTR exons
Tandem Repeats Tandem Repeats
Self Alignments Alignments of Other Repeat Browser Consensuses
-   Individual Repeat Mappings from the Human Genome    
Instances Mappings (hg38) Mappings of Random (500 or less) Genomic Instances to the Consensus
Mapping Coverage (hg38) Coverage Plot of All hg38 Instances to the Consensus
-   Meta Summits from Collections    
ENCODE DNAse ENCODE DNAse Meta Summits
ENCODE TFBS ENCODE TFBS Meta Summits
ENCODE UW Histone ENCODE UW Histone Meta Summits
Imbeault 2017 Imbeault 2017 Meta Summits
Schmittges 2016 Schmittges 2016 Meta Summits
Theunissen 2016 Theunissen 2016 Meta Summits
Tsankov 2014 Tsankov 2014 Meta Summits
-   Histone Marks & DNAse Hypersensitivity    
ENCODE DNAse Coverage ENCODE DNAse Hypersensitivity (125 cell types) v3
ENCODE DNAse Summits ENCODE DNAse Hypersensitivity (125 cell types) v3
ENCODE UW Histone Coverage ENCODE UW Histone Coverage
ENCODE UW_Histone Summits ENCODE UW_Histone Summits
-   Coverage of Chip-Seq summits from large screens    
ENCODE_TFBS ENCODE TFBS Clustered
Imbeault_Trono 2017 Imbeault_Trono Zinc Finger ChIP-Seq
Schmittges_Hughes 2016 Schmittges_Hughes Zinc Finger ChIP-Seq
theunissen2016S theunissen 2016 Primed Naive
Tsankov_Meissner 2014 Tsankov_Meissner TF ChIP-Seq in ES differentiation
-   Individual Chip-Seq summits from large screens    
ENCODE_TFBS Summits ENCODE_TFBS Summits
Imbeault_Trono 2017 Imbeault_Trono Zinc Finger ChIP-Seq
Schmittges_Hughes 2016 Schmittges_Hughes Zinc Finger ChIP-Seq
theunissen2016Summits theunissen 2016 Primed Naive
Tsankov_Meissner 2014 Tsankov_Meissner TF ChIP-Seq in ES differentiation
-   Mappings of Full Length Primate L1PA Elements    
Bonobo L1PA panPan2 Full-length Bonobo L1PA panPan2
Chimp L1PA panTro6 Full-length Chimp L1PA panTro6
Gibbon L1PA nomLeu3 Full-length Gibbon L1PA nomLeu3
Gorilla L1PA gorGor5 Full-length Gorilla L1PA gorGor5
Human L1PA hg38 Full-length Human L1PA hg38
Orang L1PA ponAbe3 Full-length Orang L1PA ponAbe3