Track Data Hubs
 

Track data hubs are collections of external tracks that can be imported into the UCSC Genome Browser. Hub tracks show up under the hub's own blue label bar on the main browser page, as well as on the configure page. For more information, including where to host your track hub, see the User's Guide.To import a public hub click its "Connect" button below.

NOTE: Because Track Hubs are created and maintained by external sources, UCSC is not responsible for their content.

Filter hubs by assembly:

Clicking Connect redirects to the gateway page of the selected hub's default assembly.
Display Hub Name Description Assemblies
Blueprint Hub Blueprint Epigenomics Data Hub hg38
BrainEpigenomeHub DNA methylation, chromatin accessibility, and gene expression data from NeuN flow-sorted human brain samples hg19
Breast Cancer lncRNA ERROR: Couldn't open https://raw.githubusercontent.com/Kraus-Lab/publichubs/master/breast_cancer_lncrna_pmid_26236012/hub.txt Debug Help hg19
Broad Improved Canine Annotation v1 Broad Institute CanFam3 Improved Annotation Data v1 canFam3
C_elegans_isolates ERROR: Host waterston.gs.washington.edu not found --> Temporary failure in name resolution Couldn't open http://waterston.gs.washington.edu/trackhubs/isolates/hub.txt Debug Help [+] CB4856Princeton_JR-contig...
CADD CADD Track for v1.3 to v1.6 hg19, hg38
Cancer Genomics Tracks TCGA and ICGC Cancer Mutations, TCGA Expression, Immune Epitopes Database (IEDB), Cancer Immunity Peptides Database, Dienstmann Variant/Cancer database, CIVIC, MyCancerGenome.org, OncoKB hg19
CEMT (CEEHRC) ERROR: Host www.bcgsc.ca not found --> No address associated with hostname Couldn't open http://www.bcgsc.ca/downloads/edcc/data/CEMT/hub/bcgsc_datahub.txt Debug Help hg38, hg19
CESAR Gene Mappings Human Exons mapped by CESAR [+] bosTau7, ailMel1, allMis1, anoCar2, calJac3...
ChIP-seq data track HUBs from MSC cells from GSE79815 ERROR: Couldn't open https://biochem.wisc.edu/sites/default/files/labs/pike/genome-ucsc/GSE79815_MSC_HUB/hub.txt Debug Help mm9
Coloc segments Colocalized segments of human genome for Roadmap cell types hg19
Cotney Lab Human Craniofacial Epigenomics ERROR: Couldn't open https://cotneylab.cam.uchc.edu/~jcotney/CRANIOFACIAL_HUB/Craniofacial_Data_Hub.txt Debug Help hg19, mm9
Cotney Lab Human Embryonic Heart Hub ERROR: TCP non-blocking connect() to cotneylab.cam.uchc.edu IP 155.37.253.210 timed-out in select() after 10000 milliseconds - Cancelling! Couldn't open http://cotneylab.cam.uchc.edu/~jcotney/HEART_HUB/heart_hub.txt Debug Help hg19, hg38
CPTAC Hub v1 ERROR: Host openslice.fenyolab.org not found --> Name or service not known Couldn't open http://openslice.fenyolab.org/tracks/CPTAC/cptac/v1/hub.txt Debug Help hg19
Croc and Bird Hub Croc, Bird, and Archosaur Assembly Hub [+] allMis2, Anc00, Anc01, Anc02, Anc03, Anc04, Anc06...
DASHR small ncRNA Hub DASHR Human small non-coding RNA data hg19
DASHR v2.0 Hub ERROR: Couldn't open http://dashr2.lisanwanglab.org/DASHRv2/tracks/DASHR2_hub.txt Debug Help hg19, hg38
dbRIP_Hub "dbRIP: Database of Polymorphic and Species-specific Retrotransposons in Humans" hg19, hg38
dbVar Hub ERROR: Couldn't open https://ftp.ncbi.nlm.nih.gov/pub/dbVar/sandbox/dbvarhub/hub.txt Debug Help hg19, hg38
DNA Methylation Hundreds of analyzed methylomes from bisulfite sequencing data [+] hg38, hg19, hg18, mm9, mm10, panTro2, panTro4, ponAbe2...
ENCODE Analysis Hub ENCODE Integrative Analysis Data Hub hg19
Ensembl Regulatory Build Evidence summaries and provisional results for the new Ensembl Regulatory Build hg38, hg19, mm10
EPD Viewer Hub ERROR: Couldn't open https://epd.epfl.ch/ucsc/epdHub/epdHub.txt Debug Help [+] hg19, hg38, mm9, mm10, danRer7, rheMac8, galGal5, rn6...
FaceBase Hub ERROR: Couldn't open http://trackhub.facebase.org/hub.txt Debug Help mm9, mm10, hg18, hg19
FANTOM5 RIKEN FANTOM5 Phase1 and Phase2 data hg38, mm10, hg19, mm9, canFam3, rn6, rheMac8, galGal5
FANTOM5 CAGE RECLU DATA RIKEN FANTOM5 CAGE clusters by RECLU hg19, hg18
GeneHancer ERROR: Couldn't open https://genecards.weizmann.ac.il/geneloc/gh_hub/hub.txt Debug Help hg38, hg19
GRC Genome Issues under Review ERROR: Host ngs.sanger.ac.uk not found --> Temporary failure in name resolution Couldn't open http://ngs.sanger.ac.uk/production/grit/track_hub/hub.txt Debug Help hg38, hg19, mm10, mm9, danRer7, danRer10, danRer11
GTEx Analysis Hub Genotype Tissue Expression (GTEx) Project Analysis Hub hg19, hg38
GTEx RNA-seq Signal Hub ERROR: Host hgdownload.soe.ucsc.edu not found --> Name or service not known Couldn't open http://hgdownload.soe.ucsc.edu/hubs/gtex/hub.txt Debug Help hg19, hg38
Hippocampal DNA methylation and gene transcription ERROR: Host public.hpcagrogenomics.wur.nl not found --> Name or service not known Couldn't open http://public.hpcagrogenomics.wur.nl/ABGC/Track_Hubs/Cognition/hub.txt Debug Help susScr3
Human cellular microRNAome microRNA RNA-seq based data from 46 primary cell types and 42 cancer or immortalized cell lines. hg38
Human cellular microRNAome barCharts Evaluation of >10 billion small RNA-seq reads from 78 primary cell types and 42 cancer or immortalized cell lines from 3 main studies. hg38
Human Global Reference Genomes Human Global Reference Genome assembly hub [+] GCA_003601015.1_HG03807_prelim_1.0...
Human Islet lncRNAs ERROR: Host www.imperial.ac.uk not found --> Temporary failure in name resolution Couldn't open http://www.imperial.ac.uk/medicine/beta-cell-genome-regulation-laboratory/data/HILNCs/HILNCs.txt Debug Help hg19
human p53 Binding And Expression Resource (BAER) hub ERROR: Couldn't open https://orio.niehs.nih.gov/ucscview/nguyen/p53BAER/hub.txt Debug Help hg19
IDEAS roadmap 20states Roadmap Epigenomics 20 state genome segmentation using the IDEAS algorithm hg19
iPSCORE_RPE ERROR: Couldn't open http://flh1.ucsd.edu/RPE_public/iPSCORE_RPE/hub.txt Debug Help hg19
JASPAR TFBS ERROR: TCP non-blocking connect() to expdata.cmmt.ubc.ca IP 137.82.44.19 timed-out in select() after 10000 milliseconds - Cancelling! Couldn't open http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/hub.txt Debug Help [+] hg19, hg38, ce10, dm6, sacCer3, danRer10, danRer11...
LIBD Human DLPFC Development RNAseq data across human brain development by age group from LIBD hg19
LNCipedia 5.2 ERROR: Couldn't open https://www.lncipedia.org/trackhub/hub.txt Debug Help hg19, hg38
McGill EMC (CEEHRC) ERROR: Couldn't open http://epigenomesportal.ca/hub/hub.txt Debug Help hg19
MGI Alleles and Phenotypes Allele's and Phenotypes from the Mouse Genome Informatics (MGI) consortium mm10
miRcode microRNA sites ERROR: Host www.mircode.org not found --> Temporary failure in name resolution Couldn't open http://www.mircode.org/ucscHub/hub.txt Debug Help hg19
mm9.SMC1.ChIAPET ERROR: Host younglab.wi.mit.edu not found --> Temporary failure in name resolution Couldn't open http://younglab.wi.mit.edu/mESC_ChIAPET_hub/hub.txt Debug Help mm9
Mouse strain assemblies ERROR: Host hgdownload.soe.ucsc.edu not found --> Temporary failure in name resolution Couldn't open http://hgdownload.soe.ucsc.edu/hubs/mouseStrains/hub.txt Debug Help [+] mm10, rn6, 129S1_SvImJ, WSB_EiJ, SPRET_EiJ, AKR_J...
Peptide evidences CNIO ERROR: Couldn't open http://apprisws.bioinfo.cnio.es/trackHubPROTEO/hub.txt Debug Help hg38, hg19
Peterhof_yeasts ERROR: Host public.dobzhanskycenter.ru not found --> Name or service not known Couldn't open http://public.dobzhanskycenter.ru/PeterhofYeastHub/hub.txt Debug Help [+] sacCer3, 1B_D1606_spades...
PhyloCSF ERROR: Couldn't open https://data.broadinstitute.org/compbio1/PhyloCSFtracks/trackHub/hub.txt Debug Help [+] hg19, hg38, mm10, galGal4, galGal6, dm6, ce11, wuhCor1...
Plants CSHL Biology of Genomes meeting 2013 demonstration assembly hub araTha1, braRap1, ricCom1
Polytract Repeats Very Short Tandem Repeats (MNR/DNR/TNR) hg38, mm10, rn6, dm6
Porcine DNA methylation ERROR: Host public.hpcagrogenomics.wur.nl not found --> Name or service not known Couldn't open http://public.hpcagrogenomics.wur.nl/ABGC/Track_Hubs/Chankyu/hub.txt Debug Help susScr3
Porcine DNA methylation and gene transcription ERROR: Host public.hpcagrogenomics.wur.nl not found --> Name or service not known Couldn't open http://public.hpcagrogenomics.wur.nl/ABGC/Track_Hubs/TJ_Tabasco/hub.txt Debug Help susScr3
Primate x4 NeuroDiff and Human CRISPRa RNAseq coverage tracks from 4 Primate neuro-differentiation assays and a human CRISPRa assay hg19, panTro4, ponAbe2, rheMac8
Principal Splice Isoforms APPRIS ERROR: Host apprisws.bioinfo.cnio.es not found --> Temporary failure in name resolution Couldn't open http://apprisws.bioinfo.cnio.es/trackHub/hub.txt Debug Help [+] hg38, hg19, mm10, danRer10, rn6, susScr3, panTro4, dm6...
Promoterome CAGE and nucleosome positioning ERROR: Host trackhub.genereg.net not found --> Temporary failure in name resolution Couldn't open http://trackhub.genereg.net/promoterome/hub.txt Debug Help danRer7
Purple sea star Assembly Hub This is the Assembly Hub of the purple sea star (Pisaster ochraceus, assembly 12Jun2017_28pcJ) 12Jun2017_28pcJ
refTSS ERROR: Host reftss.clst.riken.jp not found --> Temporary failure in name resolution Couldn't open http://reftss.clst.riken.jp/trackhub/hub.txt Debug Help hg38, mm10
ReMap 2020 Regulatory Atlas ReMap 2020: An atlas of regulatory regions from an integrative analysis of Human and Arabidopsis thaliana DNA-binding sequencing experiments. Go to ReMap for more info. hg38, araTha1
ReMap2018 Regulatory Atlas ERROR: Host remap.univ-amu.fr not found --> Temporary failure in name resolution Couldn't open http://remap.univ-amu.fr/storage/public/hubReMap2018/hub.txt Debug Help hg38
rfam12_ncRNA ERROR: ftp server error on cmd=[] response=[] ftp server error on cmd=[USER anonymous ] response=[] Couldn't open ftp://ftp.ebi.ac.uk/pub/databases/Rfam/12.0/genome_browser_hub/genomes.txt Debug Help hg38, mm10, ce10, galGal4, ci2, danRer7, dm6, sacCer3
Roadmap Epigenomics Data Complete Collection at Wash U VizHub ERROR: Host vizhub.wustl.edu not found --> Temporary failure in name resolution Couldn't open http://vizhub.wustl.edu/VizHub/RoadmapReleaseAll.txt Debug Help hg19
Roadmap Epigenomics Integrative Analysis Hub ERROR: Host vizhub.wustl.edu not found --> Temporary failure in name resolution Couldn't open http://vizhub.wustl.edu/VizHub/RoadmapIntegrative.txt Debug Help hg19
Seq-data on mm9 NS5 cells Set of sequencing data on mm9 NS5 cells mm9
Splice Site Usage Hub Splice Site Usage Values Calculated for 19 ENCODE Cell Lines from RNA-seq hg19
Synonymous Constraint Synonymous Constraint Elements and Synonymous Acceleration Elements in protein-coding regions hg19, hg38, wuhCor1
Translation Initiation Sites (TIS) Translation Initiation Sites (TIS) track hg19
UCD Methylation ERROR: TCP non-blocking connect() to lasallelab.genomecenter.ucdavis.edu IP 128.120.243.122 timed-out in select() after 10000 milliseconds - Cancelling! Couldn't open http://lasallelab.genomecenter.ucdavis.edu/UCSChub/hub.txt Debug Help [+] hg19, hg18, mm10, mm9, bosTau7, bosTau6, canFam3...
UCSC Repeat Browser 2020 Update Human Repeat consensuses annotated with lifted tracks hg38reps, hg19, hg38
Ultraconserved Elements Ultra conserved Elements in the Human Genome. Science 304(5675) pp.1321-1325 (2004) hg19
Umap and Bismap mappability ERROR: Couldn't open https://pmgenomics.ca/hoffmanlab/proj/bismap/trackhub/hub.txt Debug Help hg38, hg19, mm9, mm10
UMassMed ZHub ERROR: Couldn't open http://zlab-trackhub.umassmed.edu/shulhah/hub.txt Debug Help hg19
UniBind ERROR: Couldn't open https://unibind.uio.no/static/UniBind_hubs/hub.txt Debug Help hg38
UniProt Features ERROR: ftp server response timed out > 1000000 microsec Couldn't open ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/genome_annotation_tracks/UP000005640_9606_hub/hub.txt Debug Help hg38
VGP Vertebrate Genomes Project assemblies [+] GCA_003957555.2_bCalAnn1_v1.p...
Vista Enhancers Vista Browser Track Hub hg19, mm9, mm10
WormBase ERROR: TCP non-blocking connect() to ftp.wormbase.org IP 50.19.229.229 timed-out in select() after 10000 milliseconds - Cancelling! Can't get data socket for ftp://ftp.wormbase.org/pub/wormbase/releases/current-production-release/MULTI_SPECIES/hub/hub.txt Debug Help [+] brenneri, japonica, remanei, ovolvulus, briggsae...
Xmac ERROR: Couldn't open https://viewer.xgsc.txstate.edu/data/ucsc_track_hub/hub.txt Debug Help X.maculatus
ZebrafishGenomics Burgess Lab Zebrafish Genomic Resources danRer11, danRer10, danRer7
Blueprint Hub Blueprint Epigenomics Data Hub hg38
BrainEpigenomeHub DNA methylation, chromatin accessibility, and gene expression data from NeuN flow-sorted human brain samples hg19
Breast Cancer lncRNA ERROR: Couldn't open https://raw.githubusercontent.com/Kraus-Lab/publichubs/master/breast_cancer_lncrna_pmid_26236012/hub.txt Debug Help hg19
Broad Improved Canine Annotation v1 Broad Institute CanFam3 Improved Annotation Data v1 canFam3
C_elegans_isolates ERROR: Host waterston.gs.washington.edu not found --> Temporary failure in name resolution Couldn't open http://waterston.gs.washington.edu/trackhubs/isolates/hub.txt Debug Help [+] CB4856Princeton_JR-contig...
CADD CADD Track for v1.3 to v1.6 hg19, hg38
Cancer Genomics Tracks TCGA and ICGC Cancer Mutations, TCGA Expression, Immune Epitopes Database (IEDB), Cancer Immunity Peptides Database, Dienstmann Variant/Cancer database, CIVIC, MyCancerGenome.org, OncoKB hg19
CEMT (CEEHRC) ERROR: Host www.bcgsc.ca not found --> No address associated with hostname Couldn't open http://www.bcgsc.ca/downloads/edcc/data/CEMT/hub/bcgsc_datahub.txt Debug Help hg38, hg19
CESAR Gene Mappings Human Exons mapped by CESAR [+] bosTau7, ailMel1, allMis1, anoCar2, calJac3...
ChIP-seq data track HUBs from MSC cells from GSE79815 ERROR: Couldn't open https://biochem.wisc.edu/sites/default/files/labs/pike/genome-ucsc/GSE79815_MSC_HUB/hub.txt Debug Help mm9
Coloc segments Colocalized segments of human genome for Roadmap cell types hg19
Cotney Lab Human Craniofacial Epigenomics ERROR: Couldn't open https://cotneylab.cam.uchc.edu/~jcotney/CRANIOFACIAL_HUB/Craniofacial_Data_Hub.txt Debug Help hg19, mm9
Cotney Lab Human Embryonic Heart Hub ERROR: TCP non-blocking connect() to cotneylab.cam.uchc.edu IP 155.37.253.210 timed-out in select() after 10000 milliseconds - Cancelling! Couldn't open http://cotneylab.cam.uchc.edu/~jcotney/HEART_HUB/heart_hub.txt Debug Help hg19, hg38
CPTAC Hub v1 ERROR: Host openslice.fenyolab.org not found --> Name or service not known Couldn't open http://openslice.fenyolab.org/tracks/CPTAC/cptac/v1/hub.txt Debug Help hg19
Croc and Bird Hub Croc, Bird, and Archosaur Assembly Hub [+] allMis2, Anc00, Anc01, Anc02, Anc03, Anc04, Anc06...
DASHR small ncRNA Hub DASHR Human small non-coding RNA data hg19
DASHR v2.0 Hub ERROR: Couldn't open http://dashr2.lisanwanglab.org/DASHRv2/tracks/DASHR2_hub.txt Debug Help hg19, hg38
dbRIP_Hub "dbRIP: Database of Polymorphic and Species-specific Retrotransposons in Humans" hg19, hg38
dbVar Hub ERROR: Couldn't open https://ftp.ncbi.nlm.nih.gov/pub/dbVar/sandbox/dbvarhub/hub.txt Debug Help hg19, hg38
DNA Methylation Hundreds of analyzed methylomes from bisulfite sequencing data [+] hg38, hg19, hg18, mm9, mm10, panTro2, panTro4, ponAbe2...
ENCODE Analysis Hub ENCODE Integrative Analysis Data Hub hg19
Ensembl Regulatory Build Evidence summaries and provisional results for the new Ensembl Regulatory Build hg38, hg19, mm10
EPD Viewer Hub ERROR: Couldn't open https://epd.epfl.ch/ucsc/epdHub/epdHub.txt Debug Help [+] hg19, hg38, mm9, mm10, danRer7, rheMac8, galGal5, rn6...
FaceBase Hub ERROR: Couldn't open http://trackhub.facebase.org/hub.txt Debug Help mm9, mm10, hg18, hg19
FANTOM5 RIKEN FANTOM5 Phase1 and Phase2 data hg38, mm10, hg19, mm9, canFam3, rn6, rheMac8, galGal5
FANTOM5 CAGE RECLU DATA RIKEN FANTOM5 CAGE clusters by RECLU hg19, hg18
GeneHancer ERROR: Couldn't open https://genecards.weizmann.ac.il/geneloc/gh_hub/hub.txt Debug Help hg38, hg19
GRC Genome Issues under Review ERROR: Host ngs.sanger.ac.uk not found --> Temporary failure in name resolution Couldn't open http://ngs.sanger.ac.uk/production/grit/track_hub/hub.txt Debug Help hg38, hg19, mm10, mm9, danRer7, danRer10, danRer11
GTEx Analysis Hub Genotype Tissue Expression (GTEx) Project Analysis Hub hg19, hg38
GTEx RNA-seq Signal Hub ERROR: Host hgdownload.soe.ucsc.edu not found --> Name or service not known Couldn't open http://hgdownload.soe.ucsc.edu/hubs/gtex/hub.txt Debug Help hg19, hg38
Hippocampal DNA methylation and gene transcription ERROR: Host public.hpcagrogenomics.wur.nl not found --> Name or service not known Couldn't open http://public.hpcagrogenomics.wur.nl/ABGC/Track_Hubs/Cognition/hub.txt Debug Help susScr3
Human cellular microRNAome microRNA RNA-seq based data from 46 primary cell types and 42 cancer or immortalized cell lines. hg38
Human cellular microRNAome barCharts Evaluation of >10 billion small RNA-seq reads from 78 primary cell types and 42 cancer or immortalized cell lines from 3 main studies. hg38
Human Global Reference Genomes Human Global Reference Genome assembly hub [+] GCA_003601015.1_HG03807_prelim_1.0...
Human Islet lncRNAs ERROR: Host www.imperial.ac.uk not found --> Temporary failure in name resolution Couldn't open http://www.imperial.ac.uk/medicine/beta-cell-genome-regulation-laboratory/data/HILNCs/HILNCs.txt Debug Help hg19
human p53 Binding And Expression Resource (BAER) hub ERROR: Couldn't open https://orio.niehs.nih.gov/ucscview/nguyen/p53BAER/hub.txt Debug Help hg19
IDEAS roadmap 20states Roadmap Epigenomics 20 state genome segmentation using the IDEAS algorithm hg19
iPSCORE_RPE ERROR: Couldn't open http://flh1.ucsd.edu/RPE_public/iPSCORE_RPE/hub.txt Debug Help hg19
JASPAR TFBS ERROR: TCP non-blocking connect() to expdata.cmmt.ubc.ca IP 137.82.44.19 timed-out in select() after 10000 milliseconds - Cancelling! Couldn't open http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/hub.txt Debug Help [+] hg19, hg38, ce10, dm6, sacCer3, danRer10, danRer11...
LIBD Human DLPFC Development RNAseq data across human brain development by age group from LIBD hg19
LNCipedia 5.2 ERROR: Couldn't open https://www.lncipedia.org/trackhub/hub.txt Debug Help hg19, hg38
McGill EMC (CEEHRC) ERROR: Couldn't open http://epigenomesportal.ca/hub/hub.txt Debug Help hg19
MGI Alleles and Phenotypes Allele's and Phenotypes from the Mouse Genome Informatics (MGI) consortium mm10
miRcode microRNA sites ERROR: Host www.mircode.org not found --> Temporary failure in name resolution Couldn't open http://www.mircode.org/ucscHub/hub.txt Debug Help hg19
mm9.SMC1.ChIAPET ERROR: Host younglab.wi.mit.edu not found --> Temporary failure in name resolution Couldn't open http://younglab.wi.mit.edu/mESC_ChIAPET_hub/hub.txt Debug Help mm9
Mouse strain assemblies ERROR: Host hgdownload.soe.ucsc.edu not found --> Temporary failure in name resolution Couldn't open http://hgdownload.soe.ucsc.edu/hubs/mouseStrains/hub.txt Debug Help [+] mm10, rn6, 129S1_SvImJ, WSB_EiJ, SPRET_EiJ, AKR_J...
Peptide evidences CNIO ERROR: Couldn't open http://apprisws.bioinfo.cnio.es/trackHubPROTEO/hub.txt Debug Help hg38, hg19
Peterhof_yeasts ERROR: Host public.dobzhanskycenter.ru not found --> Name or service not known Couldn't open http://public.dobzhanskycenter.ru/PeterhofYeastHub/hub.txt Debug Help [+] sacCer3, 1B_D1606_spades...
PhyloCSF ERROR: Couldn't open https://data.broadinstitute.org/compbio1/PhyloCSFtracks/trackHub/hub.txt Debug Help [+] hg19, hg38, mm10, galGal4, galGal6, dm6, ce11, wuhCor1...
Plants CSHL Biology of Genomes meeting 2013 demonstration assembly hub araTha1, braRap1, ricCom1
Polytract Repeats Very Short Tandem Repeats (MNR/DNR/TNR) hg38, mm10, rn6, dm6
Porcine DNA methylation ERROR: Host public.hpcagrogenomics.wur.nl not found --> Name or service not known Couldn't open http://public.hpcagrogenomics.wur.nl/ABGC/Track_Hubs/Chankyu/hub.txt Debug Help susScr3
Porcine DNA methylation and gene transcription ERROR: Host public.hpcagrogenomics.wur.nl not found --> Name or service not known Couldn't open http://public.hpcagrogenomics.wur.nl/ABGC/Track_Hubs/TJ_Tabasco/hub.txt Debug Help susScr3
Primate x4 NeuroDiff and Human CRISPRa RNAseq coverage tracks from 4 Primate neuro-differentiation assays and a human CRISPRa assay hg19, panTro4, ponAbe2, rheMac8
Principal Splice Isoforms APPRIS ERROR: Host apprisws.bioinfo.cnio.es not found --> Temporary failure in name resolution Couldn't open http://apprisws.bioinfo.cnio.es/trackHub/hub.txt Debug Help [+] hg38, hg19, mm10, danRer10, rn6, susScr3, panTro4, dm6...
Promoterome CAGE and nucleosome positioning ERROR: Host trackhub.genereg.net not found --> Temporary failure in name resolution Couldn't open http://trackhub.genereg.net/promoterome/hub.txt Debug Help danRer7
Purple sea star Assembly Hub This is the Assembly Hub of the purple sea star (Pisaster ochraceus, assembly 12Jun2017_28pcJ) 12Jun2017_28pcJ
refTSS ERROR: Host reftss.clst.riken.jp not found --> Temporary failure in name resolution Couldn't open http://reftss.clst.riken.jp/trackhub/hub.txt Debug Help hg38, mm10
ReMap 2020 Regulatory Atlas ReMap 2020: An atlas of regulatory regions from an integrative analysis of Human and Arabidopsis thaliana DNA-binding sequencing experiments. Go to ReMap for more info. hg38, araTha1
ReMap2018 Regulatory Atlas ERROR: Host remap.univ-amu.fr not found --> Temporary failure in name resolution Couldn't open http://remap.univ-amu.fr/storage/public/hubReMap2018/hub.txt Debug Help hg38
rfam12_ncRNA ERROR: ftp server error on cmd=[] response=[] ftp server error on cmd=[USER anonymous ] response=[] Couldn't open ftp://ftp.ebi.ac.uk/pub/databases/Rfam/12.0/genome_browser_hub/genomes.txt Debug Help hg38, mm10, ce10, galGal4, ci2, danRer7, dm6, sacCer3
Roadmap Epigenomics Data Complete Collection at Wash U VizHub ERROR: Host vizhub.wustl.edu not found --> Temporary failure in name resolution Couldn't open http://vizhub.wustl.edu/VizHub/RoadmapReleaseAll.txt Debug Help hg19
Roadmap Epigenomics Integrative Analysis Hub ERROR: Host vizhub.wustl.edu not found --> Temporary failure in name resolution Couldn't open http://vizhub.wustl.edu/VizHub/RoadmapIntegrative.txt Debug Help hg19
Seq-data on mm9 NS5 cells Set of sequencing data on mm9 NS5 cells mm9
Splice Site Usage Hub Splice Site Usage Values Calculated for 19 ENCODE Cell Lines from RNA-seq hg19
Synonymous Constraint Synonymous Constraint Elements and Synonymous Acceleration Elements in protein-coding regions hg19, hg38, wuhCor1
Translation Initiation Sites (TIS) Translation Initiation Sites (TIS) track hg19
UCD Methylation ERROR: TCP non-blocking connect() to lasallelab.genomecenter.ucdavis.edu IP 128.120.243.122 timed-out in select() after 10000 milliseconds - Cancelling! Couldn't open http://lasallelab.genomecenter.ucdavis.edu/UCSChub/hub.txt Debug Help [+] hg19, hg18, mm10, mm9, bosTau7, bosTau6, canFam3...
UCSC Repeat Browser 2020 Update Human Repeat consensuses annotated with lifted tracks hg38reps, hg19, hg38
Ultraconserved Elements Ultra conserved Elements in the Human Genome. Science 304(5675) pp.1321-1325 (2004) hg19
Umap and Bismap mappability ERROR: Couldn't open https://pmgenomics.ca/hoffmanlab/proj/bismap/trackhub/hub.txt Debug Help hg38, hg19, mm9, mm10
UMassMed ZHub ERROR: Couldn't open http://zlab-trackhub.umassmed.edu/shulhah/hub.txt Debug Help hg19
UniBind ERROR: Couldn't open https://unibind.uio.no/static/UniBind_hubs/hub.txt Debug Help hg38
UniProt Features ERROR: ftp server response timed out > 1000000 microsec Couldn't open ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/genome_annotation_tracks/UP000005640_9606_hub/hub.txt Debug Help hg38
VGP Vertebrate Genomes Project assemblies [+] GCA_003957555.2_bCalAnn1_v1.p...
Vista Enhancers Vista Browser Track Hub hg19, mm9, mm10
WormBase ERROR: TCP non-blocking connect() to ftp.wormbase.org IP 50.19.229.229 timed-out in select() after 10000 milliseconds - Cancelling! Can't get data socket for ftp://ftp.wormbase.org/pub/wormbase/releases/current-production-release/MULTI_SPECIES/hub/hub.txt Debug Help [+] brenneri, japonica, remanei, ovolvulus, briggsae...
Xmac ERROR: Couldn't open https://viewer.xgsc.txstate.edu/data/ucsc_track_hub/hub.txt Debug Help X.maculatus
ZebrafishGenomics Burgess Lab Zebrafish Genomic Resources danRer11, danRer10, danRer7
Display Hub Name Description Assemblies
Jellyfish clytia Jellyfish clytia Hub clyHem1
Contact us to add a public hub.